Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890379.1_cds_XP_016445064.1_40055
CDS Infomation

[gene=LOC107770288] [db_xref=GeneID:107770288] [protein=protein SMAX1-LIKE 3-like] [protein_id=XP_016445064.1] [location=complement(join(10575..11633,11734..11839,12397..13562))] [gbkey=CDS]
Sequence

ATGAGAACAGGAGGCTGCACAATACAACAAGCTCTAACAACTGAAGCAGCAGCTGTTGTA
AAACAAGCTGTGCAACTTGCTAAACGTCGCGGCCATGCCCAAGTAACACCTCTTCATGTA
GCAAACACTATGCTTTCTTCTTCAAATGGTATTTTCAAAACAGCTTGTCTTCAATCTCAT
TCTCATCCCCTCCAATGCAAAGCCCTAGAGCTTTGCTTCAACGTTGCATTAAATCGCCTA
CCTGCAACGTCTTCTAGCCCCATGTTATTAGGCCATGGCCATCATCATCAATCTCAGTAT
CCTTCCATTTCTAACGCGCTTATTGCTGCCTTCAAGCGAGCCCAAGCCCACCAAAGGCGA
GGGTCGATTGAGAATCAACAACAGCCTCTTTTAGCTGTGAAAATAGAGCTTGAGCAACTT
ATTATTTCTATATTAGATGATCCTAGTGTGAGTAGGGTTATGAGGGAAGCTGGTTTTTCT
AGTCCTCAAGTCAAAACCAATGTGGAACAAGCTGTTTCTTTAGAGCTTTGCTCTCAAAAT
CCTTCTCCTAATTCAAGTAAAGAAAATAGCCAAGTAGTAACAAGTAGTAAAGTAATTACT
CCTATTTCTGTTAAAGATGAGGATGTGATGAGTGTAGTGGAAAGTTTAATGAACAAAAGA
AAGAAAAGTATTGTGATAGTTGGTGAATGTCTTGATAGTTTAGAAGGTGTGATTAAAGGG
GTGATGAATAAAGTTGATAATAGAGATGTCCCTCAAGTTTTAAAAGAAGTGAAGTTCATT
AGTTTACCACTTTTAACTTTTGGTAATATCCAAAGAGAAGAAGTTGAACAAAGAATAGGA
GAGTTGACTTGTCTTGTCAAGAGTTTAGTAGCAAAAGGAGTTGTTTTGTACTTAGGAGAT
CTTAAATGGATTGCTGATTTTAGGGTTAATAGTTGTGGTGGGCAAGGGAGAATTAGCTAC
TATTGTTCTGTGGAGCACATGATTATGGAACTTGGGAGATTGGTATGTAGTTTTGGGGAA
AATGAAAATTTTTGGCTTGTGGGAATTGCAACATTTCAAACTTACATGAGATGCAAAAGT
GGTAACAATTCATTGGAATCTATTTGGGGTCTGCATCCTGTTACAGTCCCTGGTGGCAGT
TTGGGCCTCAGTCTTAAACCTGACAGTGATACACAAAACAGTGCTTTTAACAGTGAGTCT
ACGTTGTCAAGTCTACCTTCATGGCTTCAAGATGAGATGCAAAGAAATAGTACTACTCCT
AATAATGATCAGAACTGTGTATCGGTCAAAGAGCTGCACAACAAGTGGATTACAACATGC
AGTTCTATGCATAAACAGACTAAAAGTTTTGAAAGAAGTTTGTCCTTTCCTTCTTCAAAT
GCAAATTTGGACCATAATTTGCCATTTTGGGCCAATAGGAAAACATGTGAGACAAGTTTA
AGAATCTACATTCCTGACCACAACAACGACAAAGGAAATAATGTTGCATTATTATCATCT
ACTCCAAACTCTACCCCTAATTCTGCTTTTAATTCAAGTGATGTTATTATGGAAATGGAG
TGTGTTCCAAAGTTGAAGGAATTCAATTCTGAAAATTTGAACATTTTGTCCAATGCATTA
GAGGAAATAGTCCCATGGCAAAAGGAAATTGTCCATGAAATTGCTGCCACAATATTGCAA
TGCAGGTCTGGAATGATTAGAAGAAAAGAAAAATCACTAAATATTGATAGTGAAGCAAAA
GAAGAAACTTGGTTATTTTTCCAAGGTCCTGATGTTCAAGCCAAGGAGAAAATTGCTAGA
GAATTGGCAAAGGTTGTGTTTGGATCATATTCTAATTTTGTATCAATTGCTTTGAGCAGT
TTTAAGGCAGATTCAACAGAAGATTTTAGGAACAAAAGGTCAAGAAATGAACAAAGTTGG
AGCTACATTGACAAATTTGCTCAAGCAGTAGTTTCTTCTAATAATTCTCGTTGTGTTTTC
TTCTTAGAAGATATTGAACAAGTGGATTATTTTTCTCAAAGGGGAATCAAGAAAGCTATT
GAAAGAGGAATTGTCACAAATTCAAGTGGTGAAGAATTGAGTCTAAATGATGCCATTATC
ATTTTGAGTTGTGAGAATTTTAGTTCTAAGTCAAGAGCTTGTTCTCCTACTGTGAAGCAA
AAATCATCTGAAGAAACTACAAGAAGTCCTTGTCTTTCTTTGGATTTGAATATCTCCATT
GATTATGATCAAGAAAGAGATGAAGATTTGTCCAATATTGATGATATTGGGCTTCTTCAT
AGTGTGGACAGATGCATTTTTTTCCAAAATTCAAGAGCTGTAGAAGAATAG

Peptide Sequence

PEP ID

XP_016445064.1
PEP Infomation

PREDICTED: protein SMAX1-LIKE 3-like [Nicotiana tabacum]
Sequence

MRTGGCTIQQALTTEAAAVVKQAVQLAKRRGHAQVTPLHVANTMLSSSNGIFKTACLQSH
SHPLQCKALELCFNVALNRLPATSSSPMLLGHGHHHQSQYPSISNALIAAFKRAQAHQRR
GSIENQQQPLLAVKIELEQLIISILDDPSVSRVMREAGFSSPQVKTNVEQAVSLELCSQN
PSPNSSKENSQVVTSSKVITPISVKDEDVMSVVESLMNKRKKSIVIVGECLDSLEGVIKG
VMNKVDNRDVPQVLKEVKFISLPLLTFGNIQREEVEQRIGELTCLVKSLVAKGVVLYLGD
LKWIADFRVNSCGGQGRISYYCSVEHMIMELGRLVCSFGENENFWLVGIATFQTYMRCKS
GNNSLESIWGLHPVTVPGGSLGLSLKPDSDTQNSAFNSESTLSSLPSWLQDEMQRNSTTP
NNDQNCVSVKELHNKWITTCSSMHKQTKSFERSLSFPSSNANLDHNLPFWANRKTCETSL
RIYIPDHNNDKGNNVALLSSTPNSTPNSAFNSSDVIMEMECVPKLKEFNSENLNILSNAL
EEIVPWQKEIVHEIAATILQCRSGMIRRKEKSLNIDSEAKEETWLFFQGPDVQAKEKIAR
ELAKVVFGSYSNFVSIALSSFKADSTEDFRNKRSRNEQSWSYIDKFAQAVVSSNNSRCVF
FLEDIEQVDYFSQRGIKKAIERGIVTNSSGEELSLNDAIIILSCENFSSKSRACSPTVKQ
KSSEETTRSPCLSLDLNISIDYDQERDEDLSNIDDIGLLHSVDRCIFFQNSRAVEE

Transcript Sequence

Gene sequence data has not been registered.